Development of 16S rRNA-gene-targeted group-specific primers for the detection and identification of predominant bacteria in human feces (Q34165676)

31 July 2017

title

Development of 16S rRNA-gene-targeted group-specific primers for the detection and identification of predominant bacteria in human feces (English)

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31 July 2017

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Takahiro Matsuki

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31 July 2017

Koichi Watanabe

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31 July 2017

Junji Fujimoto

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31 July 2017

Yukiko Miyamoto

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31 July 2017

Toshihiko Takada

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31 July 2017

Kazumasa Matsumoto

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31 July 2017

Hiroshi Oyaizu

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31 July 2017

Ryuichiro Tanaka

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31 July 2017

language of work or name

English

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publication date

1 November 2002

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Applied and Environmental Microbiology

31 July 2017

published in

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31 July 2017

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31 July 2017

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31 July 2017

page(s)

5445-5451

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Identification, detection, and enumeration of human bifidobacterium species by PCR targeting the transaldolase gene

31 July 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=129894

Bifidobacterial diversity in human feces detected by genus-specific PCR and denaturing gradient gel electrophoresis

5 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=129894

Denaturing gradient gel electrophoresis analysis of 16S ribosomal DNA amplicons to monitor changes in fecal bacterial populations of weaning pigs after introduction of Lactobacillus reuteri strain MM53

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=129894

Development of 16S rRNA-based probes for the Coriobacterium group and the Atopobium cluster and their application for enumeration of Coriobacteriaceae in human feces from volunteers of different age groups

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=129894

Quantification of bacterial groups within human fecal flora by oligonucleotide probe hybridization

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=129894

Quantification of different Eubacterium spp. in human fecal samples with species-specific 16S rRNA-targeted oligonucleotide probes.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=129894

Detection and identification of gastrointestinal Lactobacillus species by using denaturing gradient gel electrophoresis and species-specific PCR primers

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=129894

Direct analysis of genes encoding 16S rRNA from complex communities reveals many novel molecular species within the human gut.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=129894

Distribution of bifidobacterial species in human intestinal microflora examined with 16S rRNA-gene-targeted species-specific primers

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=129894

Development and validation of an automated, microscopy-based method for enumeration of groups of intestinal bacteria

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=129894

Phylogenetic analysis of the genus Bifidobacterium and related genera based on 16S rDNA sequences

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=129894

A new version of the RDP (Ribosomal Database Project).

5 July 2018

1 reference

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Temperature gradient gel electrophoresis analysis of 16S rRNA from human fecal samples reveals stable and host-specific communities of active bacteria.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=129894

Variations of bacterial populations in human feces measured by fluorescent in situ hybridization with group-specific 16S rRNA-targeted oligonucleotide probes

5 July 2018

1 reference

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The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools

5 July 2018

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Detection of vancomycin-resistant enterococci in fecal samples by PCR.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=129894

Identification and quantification of Bifidobacterium species isolated from food with genus-specific 16S rRNA-targeted probes by colony hybridization and PCR

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=129894

PCR detection and quantitation of predominant anaerobic bacteria in human and animal fecal samples

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=129894

Specific detection and analysis of a probiotic Bifidobacterium strain in infant feces

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=129894

The oligonucleotide probe database

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=129894

Human colonic biota studied by ribosomal DNA sequence analysis.

5 July 2018

1 reference

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Phylogeny of Bacteroides, Prevotella, and Porphyromonas spp. and related bacteria

5 July 2018

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The winds of (evolutionary) change: breathing new life into microbiology

5 July 2018

1 reference

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The phylogeny of the genus Clostridium: proposal of five new genera and eleven new species combinations.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=129894

Intestinal floras of populations that have a high risk of colon cancer

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=129894

Phylogenetic identification and in situ detection of individual microbial cells without cultivation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=129894

Quantitative fluorescence in situ hybridization of Bifidobacterium spp. with genus-specific 16S rRNA-targeted probes and its application in fecal samples.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=129894

Human Fecal Flora: The Normal Flora of 20 Japanese-Hawaiians

5 July 2018

1 reference

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Probiotics in man and animals

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=129894

5 July 2018

1 reference

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Basic local alignment search tool

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=129894

Rapid identification of 11 human intestinal Lactobacillus species by multiplex PCR assays using group- and species-specific primers derived from the 16S-23S rRNA intergenic spacer region and its flanking 23S rRNA.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=129894

Rapid identification and quantification of Collinsella aerofaciens using PCR

28 October 2018

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12 December 2020

Comparison of viable cell counts and fluorescence in situ hybridization using specific rRNA-based probes for the quantification of human fecal bacteria

1 reference

12 December 2020

PCR detection of Ruminococcus spp. in human and animal faecal samples

1 reference

12 December 2020

Rapid identification of human intestinal bifidobacteria by 16S rRNA-targeted species- and group-specific primers

1 reference

12 December 2020

[The faecal flora of man. II. The composition of bifidobacterium flora of different age groups (author's transl)]

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12 December 2020

Effect of diet on human fecal flora: comparison of Japanese and American diets

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12 December 2020

https://opencitations.net/index/coci/api/v1/citations/10.1128/MR.51.2.221-271.1987

1 reference

18 October 2022

Identifiers

DOI

10.1128/AEM.68.11.5445-5451.2002

1 reference

31 July 2017

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31 July 2017

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