Bonferroni correction

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In statistics, the Bonferroni correction states that if an experimenter is testing n dependent or independent hypotheses on a set of data, then one way of maintaining the familywise error rate is to test each individual hypothesis at a statistical significance level of 1/n times what it would be if only one hypothesis were tested. Statistically significant simply means that a given result is unlikely to have occurred by chance.

1 - (1 - α)1/n = α (corrected for n comparisons)

For example, to test two independent hypotheses on the same data at 0.05 significance level, instead of using a p value threshold of 0.05, one would use a stricter threshold equal to the square root of 0.05. Notably one can derive valid confidence intervals matching the test decision using the Bonferroni correction by using 100*(1-α1/n)% confidence intervals.

The Bonferroni correction is a safeguard against multiple tests of statistical significance on the same data falsely giving the appearance of significance, as 1 out of every 20 hypothesis-tests is expected to be significant at the α = 0.05 level purely due to chance. Furthermore, the probability of getting a significant result with n tests at this level of significance is 1-0.95n (1-probability of not getting a significant result with n tests).

It was developed by Italian mathematician Carlo Emilio Bonferroni.

A uniformly more powerful test procedure (i.e. more powerful regardless of the values of the unobservable parameters) is the Holm-Bonferroni method, however current methods for obtaining confidence intervals for the Holm-Bonferroni method do not guarantee confidence intervals that are contained within those obtained using the Bonferroni correction. A less restrictive criterion that does not control the familywise error rate is the rough false discovery rate giving (3/4)0.05 = 0.0375 for n = 2 and (21/40)0.05 = 0.02625 for n = 20.

See also

References

  • Abdi, H (2007). "Bonferroni and Sidak corrections for multiple comparisons". In N.J. Salkind (ed.) (ed.). Encyclopedia of Measurement and Statistics (PDF). Thousand Oaks, CA: Sage. {{cite book}}: |editor= has generic name (help)
  • Manitoba Centre for Health Policy (MCHP) 2008, Concept: Multiple Comparisons, http://mchp-appserv.cpe.umanitoba.ca/viewConcept.php?conceptID=1049
  • Perneger, Thomas V, What's wrong with Bonferroni adjustments, BMJ 1998;316:1236-1238 ( 18 April ) http://www.bmj.com/cgi/content/full/316/7139/1236
  • School of Psychology, University of New England, New South Wales, Australia, 2000, http://www.une.edu.au/WebStat/unit_materials/c5_inferential_statistics/bonferroni.html
  • Weisstein, Eric W. "Bonferroni Correction." From MathWorld--A Wolfram Web Resource http://mathworld.wolfram.com/BonferroniCorrection.html
  • Shaffer, J. P. "Multiple Hypothesis Testing." Ann. Rev. Psych. 46, 561-584, 1995.
  • Strassburger, K, Bretz, Frank. "Compatible simultaneous lower confidence bounds for the Holm procedure and other Bonferroni-based closed tests". Stat Med, 2008.